Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943668.1_cds_XP_016486724.1_77537
CDS Infomation

[gene=LOC107806966] [db_xref=GeneID:107806966] [protein=plant UBX domain-containing protein 8-like isoform X2] [protein_id=XP_016486724.1] [location=complement(join(5977..6084,7770..7826,7914..8057,8462..8593,8669..8884,8985..9192,9399..9514,9583..9666,9748..10333,10488..10549,13071..13154))] [gbkey=CDS]
Sequence

ATGGCGAGACCTAATCAGGAAGCAATCGATACATTCATGAACATTACTGGTGTTTCTGAA
ACCACCGCTATTCAAAAACTCGAGGAGCATGGTGGGGATCTGAATGAAGCTGTGAATGCA
CATTTCAATCAGGGGGACAGCAACAGAGTACATGCAGCACCTCTTGCTGCTGCTCCAGAT
GAGGATGCTATGGAAATAGATGATCCAATTACAGAGGAATTTCGCAGACCTCCCTTTTCA
CTTCTTTCCTCTTCTAGAAGTCCAAATCCTTTCTCCCTTCTTGATCCTAATTTCACTAGA
AGTGTGTTTGACACCGATCTTACAAGCCGTGCTCCATTTGTTTCACATCCAAGACAAGTA
AGAGAGATCCCTATTGAGGTGAAGGACGGGGATGGACAATCTGGTCATTCCAGAAATGCT
CCTATTATCGAGGATGTTACAGACACTGAGCAGACCCATGGCCCAGAAACACGTGGGACT
ATCATAGTTGATGACGATGATGACGAAGTAGTTCCAAGTCCTCTGTCAACACATGCTGCC
AGGCATCGTGATAGAACAAATGACGTTATCTTTAATGGCGACTCTACAGCAGTGTTTTCA
AGACCAAGTGCTCCTGGTGACGATGTCTTGCCTGACTATACCAATGATATTGAGGAGGAA
ATGGTTCGTGCTGCGATTGAAGCTTCCAAACGTGATGCTGAAATGTCAAACCAACAACTT
GATGTCAATAATGATCTAAGTGATCCAACGCCTCAACCAAGGCAGTCTCATCTAGAGGAT
GCTCAACTTGCACATGCAGTATCTTTGTCTTTGAAGACTGCTAAGCAGGAGAAAGCGATT
CATGAACTAGGAAGCAAAGCTATATCAGAACCAGAAGGTTACAAGCCAGCTGAGGAGGAT
GAGCGTGGAAAATCTATAACCTCAAATGGAAGATCAGAGGTGGGGAGTTCATCCGTCCCA
GATGAAGCTGAAGATTTGGAAGAGGAACCACTGGTTTGGCGCAGAAGAAAACCCATATCT
TCAGGTTCTGAAACAGCCCAAGATATCGAAGAGCATGTTGTTAGCCCATTATCAAGTCCT
CGACAGCATGATAATCTTAACCACTCCCCGAGAAACGGGGCTGACTTCCCTTCTGATGAG
TGGGGCGGCATCTCATCCCTGGAACACGATGAAGCTGTCATGCTTGAGGCTGCATTATTT
GGTGGAATACCTGAGGGTAGTGGATATCGTTTGCCTAATGTACCTCATCAGCTTATGCAG
AATGGTGTTGAGGGACCCATGGGTCCTTATCAATGGCGCATGCCTCGTCCCCCATCACCC
TCTCTTGTGGCCCAGCGTTTACTTCGGGAACAACAGGATGATGAATATCACGCTGCATTG
CAAGCTGATAGAGAAAAGGAATTGAAGGCCAAGGAAGAAGCTGAAGCTGCTCTTGAAGAA
AAGAGGCAGGAAGAGGAGGAATCACAAAGGAAAGCAGAGGAGGAAAAGGAAATGGAGAGA
CAATTAGCAGCAAAAGAAGCTTCACTTCCTCAGGAGCCAACAGCAGATAACGAGAATGCT
GTGAATCTTGTTGTACGTATGCCAGATGGCAGCCGCAGAGGGCGGCGCTTTCTCAAATCT
GATAGATTACAGTATCTTTTCGATTACATTGATGTTGGCAGAGCGGTCAAGCCTGGCACA
TACAGATTGGTAAGACCTTATCCTAGGCGTGCTTTCAGCGATGGAGAGAGTGTCCTCTCT
CTGGACGAACTGGGGTTATCCAGCAAACAAGAAGCGCTGTATCTGGAGATGATATAA

Peptide Sequence

PEP ID

XP_016486724.1
PEP Infomation

PREDICTED: plant UBX domain-containing protein 8-like isoform X2 [Nicotiana tabacum]
Sequence

MARPNQEAIDTFMNITGVSETTAIQKLEEHGGDLNEAVNAHFNQGDSNRVHAAPLAAAPD
EDAMEIDDPITEEFRRPPFSLLSSSRSPNPFSLLDPNFTRSVFDTDLTSRAPFVSHPRQV
REIPIEVKDGDGQSGHSRNAPIIEDVTDTEQTHGPETRGTIIVDDDDDEVVPSPLSTHAA
RHRDRTNDVIFNGDSTAVFSRPSAPGDDVLPDYTNDIEEEMVRAAIEASKRDAEMSNQQL
DVNNDLSDPTPQPRQSHLEDAQLAHAVSLSLKTAKQEKAIHELGSKAISEPEGYKPAEED
ERGKSITSNGRSEVGSSSVPDEAEDLEEEPLVWRRRKPISSGSETAQDIEEHVVSPLSSP
RQHDNLNHSPRNGADFPSDEWGGISSLEHDEAVMLEAALFGGIPEGSGYRLPNVPHQLMQ
NGVEGPMGPYQWRMPRPPSPSLVAQRLLREQQDDEYHAALQADREKELKAKEEAEAALEE
KRQEEEESQRKAEEEKEMERQLAAKEASLPQEPTADNENAVNLVVRMPDGSRRGRRFLKS
DRLQYLFDYIDVGRAVKPGTYRLVRPYPRRAFSDGESVLSLDELGLSSKQEALYLEMI

Transcript Sequence

Gene sequence data has not been registered.